Microscopy Image Browser (MIB) Installation
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Contents
-
Run Microscopy Image Browser under MATLAB environment -
Run Microscopy Image Browser as standalone (Windows, x64 bit) -
Run Microscopy Image Browser as standalone (MacOS, x64 bit) -
Additional info
Run Microscopy Image Browser under MATLAB environment
- Download MATLAB distribution of the program (MIB2_Matlab.zip)
- Unzip and copy MIB files to
MIB
directory in yourScripts
folder. For example, c:\MATLAB\Scripts\mib\ - Start MATLAB
- Add
MIB
starting directory (for example, c:\MATLAB\Scripts\mib\) into MATLAB path:
MATLAB->Home tab->Set path...->Add folder...->Save
alternatively use the pathtool function from MATLAB command window
- Type mib in the MATLAB command window and hit the Enter button to start the program
- Check System Requirements for further details about optional steps, such as use of Fiji, or OMERO
- Access help and tutorials from the MIB menu: MIB->Menu->Help->Help
Run Microscopy Image Browser as standalone (Windows, x64 bit)
- Download a single executable file that installs MIB (MIB2_Win.exe).
- Run MIB2_Win.exe to install MIB to your computer (requires administrative privileges). The required MATLAB Compiler Runtime (MCR) environment will be automatically installed during the process. Click here for detailed instructions .
- To start, please type MIB in the Start menu of Windows
- Check System Requirements for further details about optional steps, such as use of Fiji, or OMERO
- Access help and tutorials from the MIB menu: MIB->Menu->Help->Help
Run Microscopy Image Browser as standalone (MacOS, x64 bit)
Tested with Mac OS X (Yosemite), version 10.10.3 and MATLAB R2016a.
- Download standalone distribution of the program for Mac OS (MIB2_Mac.dmg).
- Follow the datailed instructions from MIB website MIB for Mac OS
Additional info
MIB stores its configuration parameters:
-
for Windows - C:\Users\Username\MATLAB\mib.mat or in the Windows TEMP directory (C:\Users\User-name\AppData\Local\Temp\). The TEMP directory can be found and accessed with
Windows->Start button->%TEMP%
command - for Linux - /home/username/Matlab or local TEMP directory
- for MacOS - /Users/username/Matlab or local TEMP directory
The actual path to the configuration file is dispayed in the command prompt during MIB startup. The configuration file is automatically created/updated when closing MIB
.
If MIB
does not start check MATLAB path and/or delete the configuration mib.mat file.
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