image2hdf5.m File Reference

Save image into hdf5 format. More...

Functions
function result =	image2hdf5 (filename, imageS, options)
	Save image into hdf5 format. More...

Detailed Description

Save image into hdf5 format.

Function Documentation

function result = image2hdf5	(		filename,
			imageS,
			options
	)

Save image into hdf5 format.

Parameters

filename	filename for hdf file
imageS	original dataset [1:height, 1:width, 1:colors, 1:no_stacks] or [1:height, 1:width, 1:no_stacks]
options	[optional] a structure with additional parameters .ChunkSize - a matrix [y, x, z] of chunk size .Deflate - a number 0-9, defines gzip compression level (0-9) .overwrite, if 1 do not check whether file with provided filename alaready exists .showWaitbar, 1 - show the progress bar, 0 - do not show .lutColors, - not yet implemented .pixSize, - not yet implemented .ImageDescription, - a cell string with dataset description .DatasetName, - a cell string or a containers.Map with metadata .order, - a string with order of the axes, yxczt .height - height of the full dataset, required for the initialization (i.e. when options.t==1); .width - width of the full dataset, required for the initialization (i.e. when options.t==1); .colors - number of colors of the full dataset, required for the initialization (i.e. when options.t==1); .depth - depth of the full dataset, required for the initialization (i.e. when options.t==1); .time - time of the full dataset, required for the initialization (i.e. when options.t==1); .x - define a minimal X point for data to store .y - define a minimal Y point for data to store .z - define a minimal Z point for data to store .t - define a minimal T point for data to store

Return values

result

result of the function run, 1 - success, 0 - fail

Required fields of options:

Referenced by menuFileSaveImageAs(), menuModelsSaveAs(), and mibchopDatasetGui>chopBtn_Callback().

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