mibWatershedController Class Reference

class is responsible for showing the watershed/graphcut segmentation window, available from MIB->Menu->Tools->Watershed/Graphcut segmentation More...

Inheritance diagram for mibWatershedController:

Collaboration diagram for mibWatershedController:

Public Member Functions
	mibWatershedController (mibModel)
function	closeWindow ()
	closing mibWatershedController window
function	updateWidgets ()
	update all widgets of the current window
function	updateMaterialsBtn_Callback ()
	callback for the update Materials button
function	aspectRatio_Callback ()
	callback for edit of aspect ratio edit boxes
function status =	clearPreprocessBtn_Callback ()
	callback for press of clearPreprocessBtn; clear the preprocessed data
function	mode2dRadio_Callback (hObject)
	callback for selection of the segmentation mode
function	eigenSigmaEdit_Callback ()
	callback for change of eigenSigmaEdit
function	checkDimensions (hObject)
	check entered dimensions for the dataset to precess
function	resetDimsBtn_Callback ()
	callback for resetDimsBtn - reset edit boxes with dataset dimensions
function	currentViewBtn_Callback ()
	callback for press of currentViewBtn; defines dataset from the current view
function	subAreaFromSelectionBtn_Callback ()
	callback for press of subAreaFromSelectionBtn; select subArea from the current selection layer
function	binSubareaEdit_Callback (hObject)
	callback for selection of subarea for segmentation
function	preprocessBtn_Callback ()
	callback for press of preprocessBtn; preprocess images for segmentation
function	watershedBtn_Callback ()
	callback for press watershedBtn; start segmentation
function	doImageSegmentation ()
	make image segmentation using standard watershed
function	importBtn_Callback ()
	callback for press of importBtn - import the graphcut structure

Static Public Member Functions
static function	ViewListner_Callback2 (obj, src, evnt)

Public Attributes
	mibModel
	handles to the model
	View
	handle to the view
	listener
	a cell array with handles to listeners
	preprocImg
	a variable with the preprocessed image
	mode
	a mode to use: mode2dCurrentRadio
	timerElapsed
	a variable to keep the elapsed time, when the elapsed time shorter than the timerElapsedMax the waitbar is not shown
	timerElapsedMax
	when the segmentation is longer that this number, the waitbar is displayed
EVENT	closeEvent
	> Description of events event firing when window is closed
Public Attributes inherited from handle
	addlistener
	Creates a listener for the specified event and assigns a callback function to execute when the event occurs.
	notify
	Broadcast a notice that a specific event is occurring on a specified handle object or array of handle objects.
	delete
	Handle object destructor method that is called when the object's lifecycle ends.
	disp
	Handle object disp method which is called by the display method. See the MATLAB disp function.
	display
	Handle object display method called when MATLAB software interprets an expression returning a handle object that is not terminated by a semicolon. See the MATLAB display function.
	findobj
	Finds objects matching the specified conditions from the input array of handle objects.
	findprop
	Returns a meta.property objects associated with the specified property name.
	fields
	Returns a cell array of string containing the names of public properties.
	fieldnames
	Returns a cell array of string containing the names of public properties. See the MATLAB fieldnames function.
	isvalid
	Returns a logical array in which elements are true if the corresponding elements in the input array are valid handles. This method is Sealed so you cannot override it in a handle subclass.
	eq
	Relational functions example. See details for more information.
	transpose
	Transposes the elements of the handle object array.
	permute
	Rearranges the dimensions of the handle object array. See the MATLAB permute function.
	reshape
	hanges the dimensions of the handle object array to the specified dimensions. See the MATLAB reshape function.
	sort
	ort the handle objects in any array in ascending or descending order.

Detailed Description

class is responsible for showing the watershed/graphcut segmentation window, available from MIB->Menu->Tools->Watershed/Graphcut segmentation

Constructor & Destructor Documentation

mibWatershedController()

mibWatershedController.mibWatershedController

(

mibModel

)

References handle.addlistener, mibModel, mibRescaleWidgets(), and mibUpdateFontSize().

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Member Function Documentation

aspectRatio_Callback()

function mibWatershedController.aspectRatio_Callback

(

)

callback for edit of aspect ratio edit boxes

References min.

binSubareaEdit_Callback()

function mibWatershedController.binSubareaEdit_Callback

(

hObject

)

callback for selection of subarea for segmentation

Parameters

hObject

handle to the object

Required fields of hObject:

References min.

checkDimensions()

function mibWatershedController.checkDimensions

(

hObject

)

check entered dimensions for the dataset to precess

Parameters

hObject

handle on the selected object

Required fields of hObject:

References max, and min.

clearPreprocessBtn_Callback()

function status = mibWatershedController.clearPreprocessBtn_Callback

(

)

callback for press of clearPreprocessBtn; clear the preprocessed data

closeWindow()

function mibWatershedController.closeWindow

(

)

closing mibWatershedController window

References handle.isvalid, and handle.notify.

currentViewBtn_Callback()

function mibWatershedController.currentViewBtn_Callback

(

)

callback for press of currentViewBtn; defines dataset from the current view

doImageSegmentation()

function mibWatershedController.doImageSegmentation

(

)

make image segmentation using standard watershed

References max, mibResize3d(), and min.

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eigenSigmaEdit_Callback()

function mibWatershedController.eigenSigmaEdit_Callback

(

)

callback for change of eigenSigmaEdit

importBtn_Callback()

function mibWatershedController.importBtn_Callback

(

)

callback for press of importBtn - import the graphcut structure

References max, mibInputDlg(), mibResize3d(), and min.

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mode2dRadio_Callback()

function mibWatershedController.mode2dRadio_Callback

(

hObject

)

callback for selection of the segmentation mode

Parameters

hObject

a handle to the selected radio button mode2dCurrentRadio mode2dRadio mode3dRadio mode3dGridRadio

Required fields of hObject:

preprocessBtn_Callback()

function mibWatershedController.preprocessBtn_Callback

(

)

callback for press of preprocessBtn; preprocess images for segmentation

References eig2image(), eig3volume(), Hessian2D(), Hessian3D(), max, mibResize3d(), min, and handle.notify.

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resetDimsBtn_Callback()

function mibWatershedController.resetDimsBtn_Callback

(

)

callback for resetDimsBtn - reset edit boxes with dataset dimensions

subAreaFromSelectionBtn_Callback()

function mibWatershedController.subAreaFromSelectionBtn_Callback

(

)

callback for press of subAreaFromSelectionBtn; select subArea from the current selection layer

updateMaterialsBtn_Callback()

function mibWatershedController.updateMaterialsBtn_Callback

(

)

callback for the update Materials button

updateWidgets()

function mibWatershedController.updateWidgets

(

)

update all widgets of the current window

References min.

ViewListner_Callback2()

static function mibWatershedController.ViewListner_Callback2 ( obj, src, evnt )

static

watershedBtn_Callback()

function mibWatershedController.watershedBtn_Callback

(

)

callback for press watershedBtn; start segmentation

References handle.notify.

Member Data Documentation

closeEvent

EVENT mibWatershedController.closeEvent

> Description of events event firing when window is closed

Events

closeEvent

listener

mibWatershedController.listener

a cell array with handles to listeners

mibModel

mibWatershedController.mibModel

handles to the model

Referenced by mibWatershedController().

mode

mibWatershedController.mode

a mode to use: mode2dCurrentRadio

preprocImg

mibWatershedController.preprocImg

a variable with the preprocessed image

timerElapsed

mibWatershedController.timerElapsed

a variable to keep the elapsed time, when the elapsed time shorter than the timerElapsedMax the waitbar is not shown

timerElapsedMax

mibWatershedController.timerElapsedMax

when the segmentation is longer that this number, the waitbar is displayed

View

mibWatershedController.View

handle to the view

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The documentation for this class was generated from the following file:

• Classes/@mibWatershedController/mibWatershedController.m