mibGetImarisDataset.m File Reference

Get a dataset opened in Imaris and corresponding meta-data. More...

Functions
function [ img , img_info , viewPort , lutColors , connImaris ] =	mibGetImarisDataset (connImaris)
	Get a dataset opened in Imaris and corresponding meta-data.
function imOut =	mibGetImarisDataset>getByBlocks (connImaris, colId, timePoint)

Detailed Description

Get a dataset opened in Imaris and corresponding meta-data.

Function Documentation

mibGetImarisDataset()

function [ img , img_info , viewPort , lutColors , connImaris ] = mibGetImarisDataset

(

connImaris

)

Get a dataset opened in Imaris and corresponding meta-data.

Parameters

connImaris

[optional] a handle to imaris connection

Return values

img	4D dataset
img_info	Containers.Map with meta data
viewPort	a structure with the viewPort parameters .min - a vector with minimal intensities for contrast adjustment .max - a vector with maximal intensities for contrast adjustment .gamma - a vector with gamma factor for contrast adjustment
lutColors	a matrix with LUT colors [1:colorChannel, R G B], (0-1)
connImaris	a handle to imaris connection

Required fields of connImaris:

Examples:

[img, img_info] = mibGetImarisDataset();     // get dataset from imaris 

References mibConnectToImaris(), and mibInputDlg().

Referenced by mibController.menuFileImportImage_Callback().

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mibGetImarisDataset>getByBlocks()

function imOut = mibGetImarisDataset>getByBlocks	(		connImaris,
			colId,
			timePoint )

References min.