mibImage2tiff.m File Reference

Save image in TIF format, 2D slices or 3D stacks. More...

Functions
function [ result , options ] =	mibImage2tiff (filename, imageS, options, ImageDescription)
	Save image in TIF format, 2D slices or 3D stacks.
function fn =	mibImage2tiff>generateSequentialFilename (name, num, files_no)

Detailed Description

Save image in TIF format, 2D slices or 3D stacks.

Function Documentation

mibImage2tiff()

function [ result , options ] = mibImage2tiff	(		filename,
			imageS,
			options,
			ImageDescription )

Save image in TIF format, 2D slices or 3D stacks.

Parameters

filename	filename for the output file
imageS	dataset to save [1:height, 1:width, 1:color_channels, 1:no_stacks] or [1:height, 1:width, 1:no_stacks]
options	a structure with optional parameters .cmap: a color map for indexed images, otherwise NaN .Saving3d: 'multi' - save all stacks into a single file 'sequence' - generate a sequence of files NaN -> type will be asked .overwrite, if 1 do not check whether file with provided filename already exists .Resolution - vector with two elements for X and Y resolution .Compression: 'none', 'lzw', 'packbits' .showWaitbar: show a progress bar, 1 - on, 0 - off .SliceName: [optional] A cell array with filenames without path .useOriginals: when SliceName is provided and useOriginals==1, those filenames are used
ImageDescription	- a cell string, or array of cells

Return values

result	result of the function: 1 - success, 0 - fail
options	structure with used options

Required fields of options:

Generated fields of options:

References generateSequentialFilename().

Referenced by mibChopDatasetController.chopBtn_Callback(), mibCropObjectsController.cropBtn_Callback(), mibCropObjectsController.generatePatches(), mibImage.saveImageAsDialog(), mibImage.saveMask(), and mibImage.saveModel().

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mibImage2tiff>generateSequentialFilename()

function fn = mibImage2tiff>generateSequentialFilename	(		name,
			num,
			files_no )