mib_Classifier.m File Reference

mib_Classifier function uses random forest classifier for segmentation. The function utilize Random Forest for Membrane Detection functions by Verena Kaynig see more http://www.kaynig.de/demos.html More...

Functions
function varargout =	mib_Classifier (varargin)
	mib_Classifier function uses random forest classifier for segmentation. The function utilize Random Forest for Membrane Detection functions by Verena Kaynig see more http://www.kaynig.de/demos.html More...
function	mibClassifier>mib_Classifier_OpeningFcn (hObject, eventdata, handles, varargin)
function	mibClassifier>updateWidgets (handles)
function varargout =	mibClassifier>mib_Classifier_OutputFcn (hObject, eventdata, handles)
function	mibClassifier>mib_Classifier_CloseRequestFcn (hObject, eventdata, handles)
function	mibClassifier>tempDirEdit_Callback (hObject, eventdata, handles)
function	mibClassifier>tempDirSelectBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>classifierFilenameEdit_Callback (hObject, eventdata, handles)
function	mibClassifier>updateLoglist (addText, handles)
function	mibClassifier>resetDimsBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>checkDimensions (hObject, eventdata, handles, parameter)
function	mibClassifier>binSubareaEdit_Callback (hObject, eventdata, handles)
function	mibClassifier>subAreaFromSelectionBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>currentViewBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>superpixelsBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>previewSuperpixelsBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>calcFeaturesBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>trainClassifierToggle_Callback (hObject, eventdata, handles)
function	mibClassifier>trainClassifierBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>predictSlice_Callback (hObject, eventdata, handles)
function	mibClassifier>wipeTempDirBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>helpBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>predictDatasetBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>classifierPopup_Callback (hObject, eventdata, handles)
function	mibClassifier>loadClassifierBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>updateMaterialsBtn_Callback (hObject, eventdata, handles)
function	mibClassifier>superpixelTypeRadio_Callback (hObject, eventdata, handles)

Detailed Description

mib_Classifier function uses random forest classifier for segmentation. The function utilize Random Forest for Membrane Detection functions by Verena Kaynig see more http://www.kaynig.de/demos.html

Function Documentation

function varargout = mib_Classifier

(

varargin

)

mib_Classifier function uses random forest classifier for segmentation. The function utilize Random Forest for Membrane Detection functions by Verena Kaynig see more http://www.kaynig.de/demos.html

mib_Classifier contains MATLAB code for mib_Classifier.fig

Referenced by imbrowser>menuToolsClassifiersSuperpixels_Callback().

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function mibClassifier>binSubareaEdit_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>calcFeaturesBtn_Callback	(		hObject,
			eventdata,
			handles
	)

References imRAG(), membraneFeatures(), and mib_resize3d().

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function mibClassifier>checkDimensions	(		hObject,
			eventdata,
			handles,
			parameter
	)

function mibClassifier>classifierFilenameEdit_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>classifierPopup_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>currentViewBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>helpBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>loadClassifierBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>mib_Classifier_CloseRequestFcn	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>mib_Classifier_OpeningFcn	(		hObject,
			eventdata,
			handles,
			varargin
	)

References ib_updateFontSize(), and mib_rescaleWidgets().

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function varargout = mibClassifier>mib_Classifier_OutputFcn	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>predictDatasetBtn_Callback	(		hObject,
			eventdata,
			handles
	)

References classRF_predict(), createModelBtn_Callback(), ib_do_backup(), and mib_resize3d().

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function mibClassifier>predictSlice_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>previewSuperpixelsBtn_Callback	(		hObject,
			eventdata,
			handles
	)

References mib_resize3d().

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function mibClassifier>resetDimsBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>subAreaFromSelectionBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>superpixelsBtn_Callback	(		hObject,
			eventdata,
			handles
	)

References mib_resize3d().

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function mibClassifier>superpixelTypeRadio_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>tempDirEdit_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>tempDirSelectBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>trainClassifierBtn_Callback	(		hObject,
			eventdata,
			handles
	)

References classRF_train(), ib_do_backup(), and mib_resize3d().

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function mibClassifier>trainClassifierToggle_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>updateLoglist	(		addText,
			handles
	)

function mibClassifier>updateMaterialsBtn_Callback	(		hObject,
			eventdata,
			handles
	)

function mibClassifier>updateWidgets

(

handles

)

function mibClassifier>wipeTempDirBtn_Callback	(		hObject,
			eventdata,
			handles
	)