Microscopy Image Browser  1.233
All Classes Files Functions Variables Pages
im_browser.m File Reference

Functions

function
varargout = 
im_browser (varargin)
 
function  imbrowser>im_browser_OpeningFcn (hObject, eventdata, handles, varargin)
 
function
varargout = 
imbrowser>im_browser_OutputFcn (unused1, unused2, handles)
 
function  imbrowser>drivePopup_Callback (hObject, eventdata, handles)
 
function  imbrowser>pathEdit_Callback (hObject, eventdata, handles)
 
function  imbrowser>folderselectBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>updatefilelistBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>im_filterPopup_Callback (unused1, unused2, handles)
 
function  imbrowser>segmShowTypePopup_Callback (unused1, unused2, handles)
 
function  imbrowser>segmSelList_Callback (hObject, unused1, handles)
 
function  imbrowser>addMaterialBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>magicwandConnectCheck_Callback (unused1, unused2, handles)
 
function  imbrowser>filterTypePopup_Callback (unused1, unused2, handles)
 
function  imbrowser>mainPanPopup_Callback (unused1, unused2, handles)
 
function  imbrowser>brightnessBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>roiList_Callback (unused1, eventdata, handles)
 
function  imbrowser>bioformatsCheck_Callback (unused1, unused2, handles)
 
function  imbrowser>AdaptiveDilateCheck_Callback (unused1, unused2, handles)
 
function  imbrowser>changelayerSliderContext_cb (hObject, unused1, parameter)
 
function  imbrowser>changeThresholdValueContext_cb (hObject, unused1, parameter)
 
function  imbrowser>magicwandConnectCheck4_Callback (unused1, unused2, handles)
 
function  imbrowser>contrastBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>backgroundProfileChk_Callback (unused1, unused2, handles)
 
function  imbrowser>backgroundRemoveBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>bwFilterGridCheck_Callback (hObject, unused1, handles)
 
function  imbrowser>menuSelectionSizeFilter (unused1, unused2, handles, type)
 
function  imbrowser>syncModelLists_Callback (hObject, unused1, type)
 
function  imbrowser>imAdjustBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>backgroundLocNormSw_Callback (hObject, eventdata, handles)
 
function  imbrowser>anDiffDoBtn_Callback (unused1, unused2, handles)
 
function
handles = 
imbrowser>anDiffOptionsBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>anDiffTestrunBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>corrModeCombo_Callback (unused1, unused2, handles)
 
function  imbrowser>corrManualRadio_Callback (hObject, unused1, handles)
 
function  imbrowser>corrCalculateButton_Callback (unused1, unused2, handles)
 
function  imbrowser>corrGridCheck_Callback (unused1, unused2, handles)
 
function  imbrowser>corrTypeCombo_Callback (unused1, unused2, handles)
 
function  imbrowser>corrAbsvsEdit_Callback (unused1, eventdata, handles)
 
function
handles = 
imbrowser>getMaskStats (handles)
 
function  imbrowser>maskRecalcStatsBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>maskGenTypePopup_Callback (unused1, unused2, handles)
 
function  imbrowser>maskGenBtn_Callback (hObject, unused1, unused2, type)
 
function  imbrowser>logBtn_Callback (unused1, unused2, handles)
 
function  imbrowser>adaptiveSmoothCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>channelMixerTable_CellEditCallback (hObject, eventdata, handles)
 
function  imbrowser>segmTrackStraightChk_Callback (hObject, eventdata, handles)
 
function  imbrowser>im_browser_DeleteFcn (hObject, eventdata, handles)
 
function  imbrowser>lastSliceBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>firstSliceBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>firstTimeBtn_Callback (hObject, eventdata, handles)
 
function status = imbrowser>editbox_Callback (hObject, eventdata, handles, chtype, default_val, variation)
 
function  imbrowser>maskedAreaCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>segmList_Callback (hObject, eventdata, handles)
 
function  imbrowser>segmAddList_Callback (hObject, eventdata, handles)
 
function  imbrowser>bufferToggle_Callback (hObject, eventdata, handles)
 
function  imbrowser>actions3dCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>importFijiBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>exportFijiBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>fijirunmacroBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>fijiSelectFileBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>filterSelectionPopup_Callback (hObject, eventdata, handles)
 
function  imbrowser>lutCheckbox_Callback (hObject, eventdata, handles)
 
function  imbrowser>fileinfoBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>segmFavToolCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>liveStretchCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>seeAllMaterialsCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>showAnnotationsCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>annMarkerCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>imageRedraw (hObject, eventdata, handles)
 
function  imbrowser>menuModelAnnRemoveAll_Callback (hObject, eventdata, handles)
 
function  imbrowser>labelsBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>maskGenPanelModeRadioPanel_Callback (hObject, eventdata)
 
function  imbrowser>segmWatershedSegmBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>morphPanelTypeSelectPopup_Callback (hObject, eventdata, handles)
 
function  imbrowser>eraserEdit_Callback (hObject, eventdata, handles)
 
function  imbrowser>roiManualCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>roiOptionsBtn_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuFileImportImage_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuFileOmeroImport_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuFileChoppedImage_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuFileExportImage_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuFileSaveImageAs_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuFileMakeMovie_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuFileSnapshot_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuFileRenderFiji_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuFilePreferences_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuDatasetAlignDatasets_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuDatasetCrop_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuDatasetResample_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuDatasetTrasform_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuDatasetSlice_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuDatasetScalebar_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuDatasetBoundingBox_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuDatasetParameters_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuImageMode_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuImageColorCh_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuImageContrast_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuImageInvert_Callback (hObject, eventdata, handles, par1)
 
function  imbrowser>menuImageMorphOps_Callback (unused1, unused2, handles, type)
 
function  imbrowser>menuImageIntensity_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuImageHistogram_Callback (unused1, eventdata, handles)
 
function  imbrowser>menuModelsNew_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuModelsLoad_Callback (unused1, eventdata, handles)
 
function  imbrowser>menuModelsImport_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuModelsExport_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuModelsSave_Callback (unused1, eventdata, handles)
 
function  imbrowser>menuModelsSaveAs_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuModelsRender_Callback (hObject, eventdata, handles, type)
 
function  imbrowser>menuModelFillMembrane_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuModelAnn_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuModelsStatistics_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuMask2Sel_Callback (hObject, eventdata, handles, p1, p2, p3, p4)
 
function  imbrowser>menuMaskClear_Callback (unused1, eventdata, handles)
 
function  imbrowser>menuMaskLoad_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuMaskImport_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuMaskExport_Callback (unused1, unused2, handles)
 
function  imbrowser>menuMaskSaveAs_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuMaskInvert_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuMaskSizeFilter_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuMaskImageReplace_Callback (unused1, unused2, handles)
 
function  imbrowser>menuMaskSmooth_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuMaskStats_Callback (hObject, unused1, handles)
 
function  imbrowser>menuSelectionBuffer_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuSelection2Mask_Callback (hObject, eventdata, handles, p1, p2, p3, p4)
 
function  imbrowser>menuSelectionMorphOps_Callback (hObject, unused1, unused2, type)
 
function  imbrowser>menuSelectionToMaskBorder_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuSelectionInterpolate_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuSelectionSizeFilter_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuSelectionImageReplace_Callback (unused1, unused2, handles)
 
function  imbrowser>menuSelectionInvert_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuToolsMeasure_Callback (hObject, eventdata, handles, parameter)
 
function  imbrowser>menuToolsStereology_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuToolsClassifiersMembrane_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuToolsClassifiersSuperpixels_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuToolsWatershed_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuHelpHelp_Callback (hObject, eventdata, handles, page)
 
function  imbrowser>helpBtn_Callback (hObject, eventdata, handles, type)
 
function  imbrowser>menuHelpUpdate_Callback (hObject, eventdata, handles)
 
function  imbrowser>menuHelpAbout_Callback (unused1, unused2, handles)
 
function  imbrowser>zoomToolbar_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarUndo_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarRedo_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarMovie_ClickedCallback (unused1, unused2, handles)
 
function  imbrowser>toolbarPlaneToggle_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarInterpolation_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarResizingMethod_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarBlockModeSwitch_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarShowROISwitch_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>toolbarParProcBtn_ClickedCallback (unused1, unused2, handles)
 
function  imbrowser>toolbarSwapMouse_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>mouseWheelToolbarSw_ClickedCallback (hObject, eventdata, handles)
 
function  imbrowser>segmBW_Update (hObject, eventdata, handles)
 
function  imbrowser>brushSuperpixelsCheck_Callback (hObject, eventdata, handles)
 
function  imbrowser>devTest_ClickedCallback (hObject, eventdata, handles)
 

Function Documentation

function varargout = im_browser (   varargin)

Referenced by im_browser_deploy(), and updateMIB>updateBtn_Callback().

Here is the caller graph for this function:

function imbrowser>actions3dCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>AdaptiveDilateCheck_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>adaptiveSmoothCheck_Callback (   hObject,
  eventdata,
  handles 
)

References mib_inputdlg().

Here is the call graph for this function:

function imbrowser>addMaterialBtn_Callback (   hObject,
  eventdata,
  handles 
)

References createModelBtn_Callback(), mib_inputdlg(), unFocus(), and updateSegmentationLists().

Here is the call graph for this function:

function imbrowser>anDiffDoBtn_Callback (   unused1,
  unused2,
  handles 
)

References ib_anisotropicDiffusion().

Here is the call graph for this function:

function handles = imbrowser>anDiffOptionsBtn_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>anDiffTestrunBtn_Callback (   unused1,
  unused2,
  handles 
)

References ib_anisotropicDiffusion().

Here is the call graph for this function:

function imbrowser>annMarkerCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>backgroundLocNormSw_Callback (   hObject,
  eventdata,
  handles 
)

References backgroundStrelSmoothingChk_Callback().

Here is the call graph for this function:

function imbrowser>backgroundProfileChk_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>backgroundRemoveBtn_Callback (   unused1,
  unused2,
  handles 
)

References ib_removeBackground().

Here is the call graph for this function:

function imbrowser>bioformatsCheck_Callback (   unused1,
  unused2,
  handles 
)

References update_filelist().

Here is the call graph for this function:

function imbrowser>brightnessBtn_Callback (   unused1,
  unused2,
  handles 
)

References ib_autoBrightness().

Here is the call graph for this function:

function imbrowser>brushSuperpixelsCheck_Callback (   hObject,
  eventdata,
  handles 
)

References brushSuperpixelsCheck().

Here is the call graph for this function:

function imbrowser>bufferToggle_Callback (   hObject,
  eventdata,
  handles 
)

References update_filelist(), and updateGuiWidgets().

Here is the call graph for this function:

function imbrowser>bwFilterGridCheck_Callback (   hObject,
  unused1,
  handles 
)

References mib_inputdlg().

Here is the call graph for this function:

function imbrowser>changelayerSliderContext_cb (   hObject,
  unused1,
  parameter 
)
function imbrowser>changeThresholdValueContext_cb (   hObject,
  unused1,
  parameter 
)

References mib_inputdlg().

Here is the call graph for this function:

function imbrowser>channelMixerTable_CellEditCallback (   hObject,
  eventdata,
  handles 
)

References redrawChannelMixerTable().

Here is the call graph for this function:

function imbrowser>contrastBtn_Callback (   unused1,
  unused2,
  handles 
)

References ib_linearContrast().

Here is the call graph for this function:

function imbrowser>corrAbsvsEdit_Callback (   unused1,
  eventdata,
  handles 
)

References editbox_Callback().

Here is the call graph for this function:

function imbrowser>corrCalculateButton_Callback (   unused1,
  unused2,
  handles 
)

References ib_calcCorrelation().

Here is the call graph for this function:

function imbrowser>corrGridCheck_Callback (   unused1,
  unused2,
  handles 
)

References mib_inputdlg().

Here is the call graph for this function:

function imbrowser>corrManualRadio_Callback (   hObject,
  unused1,
  handles 
)
function imbrowser>corrModeCombo_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>corrTypeCombo_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>devTest_ClickedCallback (   hObject,
  eventdata,
  handles 
)
function imbrowser>drivePopup_Callback (   hObject,
  eventdata,
  handles 
)

References update_filelist().

Here is the call graph for this function:

function status = imbrowser>editbox_Callback (   hObject,
  eventdata,
  handles,
  chtype,
  default_val,
  variation 
)

References unFocus().

Here is the call graph for this function:

function imbrowser>eraserEdit_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>exportFijiBtn_Callback (   hObject,
  eventdata,
  handles 
)

References ib_exportToFiji().

Here is the call graph for this function:

function imbrowser>fijirunmacroBtn_Callback (   hObject,
  eventdata,
  handles 
)

References ib_runFijiMacro().

Here is the call graph for this function:

function imbrowser>fijiSelectFileBtn_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>fileinfoBtn_Callback (   hObject,
  eventdata,
  handles 
)

References ib_datasetInfoGui().

Here is the call graph for this function:

function imbrowser>filterSelectionPopup_Callback (   hObject,
  eventdata,
  handles 
)

References ib_updateCursor().

Here is the call graph for this function:

function imbrowser>filterTypePopup_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>firstSliceBtn_Callback (   hObject,
  eventdata,
  handles 
)

References changelayerEdit_Callback().

Here is the call graph for this function:

function imbrowser>firstTimeBtn_Callback (   hObject,
  eventdata,
  handles 
)

References changeTimeEdit_Callback().

Here is the call graph for this function:

function imbrowser>folderselectBtn_Callback (   unused1,
  unused2,
  handles 
)

References update_filelist().

Here is the call graph for this function:

function handles = imbrowser>getMaskStats (   handles)
function imbrowser>helpBtn_Callback (   hObject,
  eventdata,
  handles,
  type 
)
function imbrowser>im_browser_DeleteFcn (   hObject,
  eventdata,
  handles 
)
function varargout = imbrowser>im_browser_OutputFcn (   unused1,
  unused2,
  handles 
)
function imbrowser>im_filterPopup_Callback (   unused1,
  unused2,
  handles 
)

References update_filelist().

Here is the call graph for this function:

function imbrowser>imAdjustBtn_Callback (   unused1,
  unused2,
  handles 
)

References imAdjustments().

Here is the call graph for this function:

function imbrowser>imageRedraw (   hObject,
  eventdata,
  handles 
)
function imbrowser>importFijiBtn_Callback (   hObject,
  eventdata,
  handles 
)

References ib_importFromFiji().

Here is the call graph for this function:

function imbrowser>labelsBtn_Callback (   hObject,
  eventdata,
  handles 
)

References ib_labelsGui().

Here is the call graph for this function:

function imbrowser>lastSliceBtn_Callback (   hObject,
  eventdata,
  handles 
)

References changelayerEdit_Callback().

Here is the call graph for this function:

function imbrowser>liveStretchCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>logBtn_Callback (   unused1,
  unused2,
  handles 
)

References logList().

Here is the call graph for this function:

function imbrowser>lutCheckbox_Callback (   hObject,
  eventdata,
  handles 
)

References redrawChannelMixerTable(), and unFocus().

Here is the call graph for this function:

function imbrowser>magicwandConnectCheck4_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>magicwandConnectCheck_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>mainPanPopup_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>maskedAreaCheck_Callback (   hObject,
  eventdata,
  handles 
)

References unFocus().

Here is the call graph for this function:

function imbrowser>maskGenBtn_Callback (   hObject,
  unused1,
  unused2,
  type 
)

References ib_maskGenerator().

Here is the call graph for this function:

function imbrowser>maskGenPanelModeRadioPanel_Callback (   hObject,
  eventdata 
)
function imbrowser>maskGenTypePopup_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>maskRecalcStatsBtn_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>menuDatasetAlignDatasets_Callback (   hObject,
  eventdata,
  handles 
)

References menuDatasetAlignDatasets().

Here is the call graph for this function:

function imbrowser>menuDatasetBoundingBox_Callback (   hObject,
  eventdata,
  handles 
)

References menuDatasetBoundingBox().

Here is the call graph for this function:

function imbrowser>menuDatasetCrop_Callback (   hObject,
  eventdata,
  handles 
)

References menuDatasetCrop().

Here is the call graph for this function:

function imbrowser>menuDatasetParameters_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>menuDatasetResample_Callback (   hObject,
  eventdata,
  handles 
)

References menuDatasetResample().

Here is the call graph for this function:

function imbrowser>menuDatasetScalebar_Callback (   hObject,
  eventdata,
  handles 
)

References mib_calibrateScaleBar().

Here is the call graph for this function:

function imbrowser>menuDatasetSlice_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuDatasetSlice().

Here is the call graph for this function:

function imbrowser>menuDatasetTrasform_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuDatasetTransform().

Here is the call graph for this function:

function imbrowser>menuFileChoppedImage_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuFileChoppedImage().

Here is the call graph for this function:

function imbrowser>menuFileExportImage_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuFileExportImage().

Here is the call graph for this function:

function imbrowser>menuFileImportImage_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuFileImportImage().

Here is the call graph for this function:

function imbrowser>menuFileMakeMovie_Callback (   hObject,
  eventdata,
  handles 
)

References menuFileMakeMovie().

Here is the call graph for this function:

function imbrowser>menuFileOmeroImport_Callback (   hObject,
  eventdata,
  handles 
)

References menuFileOmeroImport().

Here is the call graph for this function:

function imbrowser>menuFilePreferences_Callback (   hObject,
  eventdata,
  handles 
)

References menuFilePreferences().

Here is the call graph for this function:

function imbrowser>menuFileRenderFiji_Callback (   hObject,
  eventdata,
  handles 
)

References ib_renderVolumeWithFiji().

Here is the call graph for this function:

function imbrowser>menuFileSaveImageAs_Callback (   hObject,
  eventdata,
  handles 
)

References menuFileSaveImageAs().

Here is the call graph for this function:

function imbrowser>menuFileSnapshot_Callback (   hObject,
  eventdata,
  handles 
)

References menuFileSnapshot().

Here is the call graph for this function:

function imbrowser>menuHelpAbout_Callback (   unused1,
  unused2,
  handles 
)

References ib_aboutDlg().

Here is the call graph for this function:

function imbrowser>menuHelpHelp_Callback (   hObject,
  eventdata,
  handles,
  page 
)
function imbrowser>menuHelpUpdate_Callback (   hObject,
  eventdata,
  handles 
)

References ib_checkUpdate(), and im_browser_CloseRequestFcn().

Here is the call graph for this function:

function imbrowser>menuImageColorCh_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuImageColorCh().

Here is the call graph for this function:

function imbrowser>menuImageContrast_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuImageContrast().

Here is the call graph for this function:

function imbrowser>menuImageHistogram_Callback (   unused1,
  eventdata,
  handles 
)

References mib_contrastContext_cb().

Here is the call graph for this function:

function imbrowser>menuImageIntensity_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuImageIntensity().

Here is the call graph for this function:

function imbrowser>menuImageInvert_Callback (   hObject,
  eventdata,
  handles,
  par1 
)

References ib_invertImage().

Here is the call graph for this function:

function imbrowser>menuImageMode_Callback (   hObject,
  eventdata,
  handles 
)

References menuImageMode().

Here is the call graph for this function:

function imbrowser>menuImageMorphOps_Callback (   unused1,
  unused2,
  handles,
  type 
)

References ib_imageMorphOpsGui().

Here is the call graph for this function:

function imbrowser>menuMask2Sel_Callback (   hObject,
  eventdata,
  handles,
  p1,
  p2,
  p3,
  p4 
)

References ib_moveLayers().

Here is the call graph for this function:

function imbrowser>menuMaskClear_Callback (   unused1,
  eventdata,
  handles 
)

References ib_do_backup().

Here is the call graph for this function:

function imbrowser>menuMaskExport_Callback (   unused1,
  unused2,
  handles 
)

References mib_inputdlg().

Here is the call graph for this function:

function imbrowser>menuMaskImageReplace_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>menuMaskImport_Callback (   hObject,
  eventdata,
  handles 
)

References menuMaskImport().

Here is the call graph for this function:

function imbrowser>menuMaskInvert_Callback (   hObject,
  eventdata,
  handles 
)

References menuMaskInvert().

Here is the call graph for this function:

function imbrowser>menuMaskLoad_Callback (   hObject,
  eventdata,
  handles 
)

References menuMaskLoad().

Here is the call graph for this function:

function imbrowser>menuMaskSaveAs_Callback (   hObject,
  eventdata,
  handles 
)

References menuMaskSaveAs().

Here is the call graph for this function:

function imbrowser>menuMaskSizeFilter_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>menuMaskSmooth_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References smoothImage_Callback().

Here is the call graph for this function:

function imbrowser>menuMaskStats_Callback (   hObject,
  unused1,
  handles 
)

References MaskStatsDlg().

Here is the call graph for this function:

function imbrowser>menuModelAnn_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)
function imbrowser>menuModelAnnRemoveAll_Callback (   hObject,
  eventdata,
  handles 
)

References ib_do_backup().

Here is the call graph for this function:

function imbrowser>menuModelFillMembrane_Callback (   hObject,
  eventdata,
  handles 
)

References menuModelFillMembrane().

Here is the call graph for this function:

function imbrowser>menuModelsExport_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuModelsExport().

Here is the call graph for this function:

function imbrowser>menuModelsImport_Callback (   hObject,
  eventdata,
  handles 
)

References menuModelsImport().

Here is the call graph for this function:

function imbrowser>menuModelsLoad_Callback (   unused1,
  eventdata,
  handles 
)

References loadModelBtn_Callback().

Here is the call graph for this function:

function imbrowser>menuModelsNew_Callback (   hObject,
  eventdata,
  handles 
)

References createModelBtn_Callback().

Here is the call graph for this function:

function imbrowser>menuModelsRender_Callback (   hObject,
  eventdata,
  handles,
  type 
)

References ib_renderModelImaris(), and model_cm_Callback().

Here is the call graph for this function:

function imbrowser>menuModelsSave_Callback (   unused1,
  eventdata,
  handles 
)

References saveModelToolbar_ClickedCallback().

Here is the call graph for this function:

function imbrowser>menuModelsSaveAs_Callback (   hObject,
  eventdata,
  handles 
)

References menuModelsSaveAs().

Here is the call graph for this function:

function imbrowser>menuModelsStatistics_Callback (   hObject,
  eventdata,
  handles 
)

References model_cm_Callback().

Here is the call graph for this function:

function imbrowser>menuSelection2Mask_Callback (   hObject,
  eventdata,
  handles,
  p1,
  p2,
  p3,
  p4 
)

References ib_moveLayers().

Here is the call graph for this function:

function imbrowser>menuSelectionBuffer_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuSelectionBuffer().

Here is the call graph for this function:

function imbrowser>menuSelectionImageReplace_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>menuSelectionInterpolate_Callback (   hObject,
  eventdata,
  handles 
)

References menuSelectionInterpolate().

Here is the call graph for this function:

function imbrowser>menuSelectionInvert_Callback (   hObject,
  eventdata,
  handles 
)

References menuSelectionInvert().

Here is the call graph for this function:

function imbrowser>menuSelectionMorphOps_Callback (   hObject,
  unused1,
  unused2,
  type 
)

References ib_MorphOpsGui().

Here is the call graph for this function:

function imbrowser>menuSelectionSizeFilter (   unused1,
  unused2,
  handles,
  type 
)

References ib_sizeExclusionFilter().

Here is the call graph for this function:

function imbrowser>menuSelectionSizeFilter_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>menuSelectionToMaskBorder_Callback (   hObject,
  eventdata,
  handles 
)

References menuSelectionToMaskBorder().

Here is the call graph for this function:

function imbrowser>menuToolsClassifiersMembrane_Callback (   hObject,
  eventdata,
  handles 
)

References ib_MembraneDetection().

Here is the call graph for this function:

function imbrowser>menuToolsClassifiersSuperpixels_Callback (   hObject,
  eventdata,
  handles 
)

References mib_Classifier().

Here is the call graph for this function:

function imbrowser>menuToolsMeasure_Callback (   hObject,
  eventdata,
  handles,
  parameter 
)

References menuToolsMeasure().

Here is the call graph for this function:

function imbrowser>menuToolsStereology_Callback (   hObject,
  eventdata,
  handles 
)

References mib_stereologyGui().

Here is the call graph for this function:

function imbrowser>menuToolsWatershed_Callback (   hObject,
  eventdata,
  handles 
)

References ib_watershedGui().

Here is the call graph for this function:

function imbrowser>morphPanelTypeSelectPopup_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>mouseWheelToolbarSw_ClickedCallback (   hObject,
  eventdata,
  handles 
)
function imbrowser>pathEdit_Callback (   hObject,
  eventdata,
  handles 
)

References update_filelist().

Here is the call graph for this function:

function imbrowser>roiList_Callback (   unused1,
  eventdata,
  handles 
)

References roiShowCheck_Callback().

Here is the call graph for this function:

function imbrowser>roiManualCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>roiOptionsBtn_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>seeAllMaterialsCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>segmAddList_Callback (   hObject,
  eventdata,
  handles 
)

References unFocus().

Here is the call graph for this function:

function imbrowser>segmBW_Update (   hObject,
  eventdata,
  handles 
)

References ib_segmentBlackWhiteThreshold(), and unFocus().

Here is the call graph for this function:

function imbrowser>segmFavToolCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>segmList_Callback (   hObject,
  eventdata,
  handles 
)

References unFocus().

Here is the call graph for this function:

function imbrowser>segmSelList_Callback (   hObject,
  unused1,
  handles 
)

References segmSelectedOnlyCheck_Callback(), and unFocus().

Here is the call graph for this function:

function imbrowser>segmShowTypePopup_Callback (   unused1,
  unused2,
  handles 
)
function imbrowser>segmTrackStraightChk_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>segmWatershedSegmBtn_Callback (   hObject,
  eventdata,
  handles 
)

References ib_segmentation_SmartWatershed().

Here is the call graph for this function:

function imbrowser>showAnnotationsCheck_Callback (   hObject,
  eventdata,
  handles 
)
function imbrowser>syncModelLists_Callback (   hObject,
  unused1,
  type 
)
function imbrowser>toolbarBlockModeSwitch_ClickedCallback (   hObject,
  eventdata,
  handles 
)
function imbrowser>toolbarInterpolation_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References toolbarInterpolation().

Here is the call graph for this function:

function imbrowser>toolbarMovie_ClickedCallback (   unused1,
  unused2,
  handles 
)
function imbrowser>toolbarParProcBtn_ClickedCallback (   unused1,
  unused2,
  handles 
)
function imbrowser>toolbarPlaneToggle_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References toolbarPlaneToggle().

Here is the call graph for this function:

function imbrowser>toolbarRedo_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References ib_do_undo().

Here is the call graph for this function:

function imbrowser>toolbarResizingMethod_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References toolbarResizingMethod().

Here is the call graph for this function:

function imbrowser>toolbarShowROISwitch_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References roiShowCheck_Callback().

Here is the call graph for this function:

function imbrowser>toolbarSwapMouse_ClickedCallback (   hObject,
  eventdata,
  handles 
)
function imbrowser>toolbarUndo_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References ib_do_undo().

Here is the call graph for this function:

function imbrowser>updatefilelistBtn_Callback (   unused1,
  unused2,
  handles 
)

References update_filelist().

Here is the call graph for this function:

function imbrowser>zoomToolbar_ClickedCallback (   hObject,
  eventdata,
  handles 
)

References toolbar_zoomBtn().

Here is the call graph for this function: