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3D Modeling and segmentation (html, pdf) 1: how to open dataset and start a new model ![]() 2: brush, shape interpolation, local thresholding ![]() 3: membrane tracker and line interpolation ![]() 4: improving nuclear envelope ![]() 5: thresholding with statistical filtering ![]() 6: magic wand and Frangi filter ![]() 7: random forest classifier ![]() 8: fixing mitochondria and final visualization ![]() |
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Semi-automatic graphcut segmentation ![]() |
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3D Lines for skeletons and measurements ![]() |
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DeepMIBL Deep-learning segmentation using 2.5D Depth-to-Colors workflow in MIB ![]() DeepMIB: 2D U-net for image segmentation ![]() DeepMIB: 3D U-net for image segmentation ![]() DeepMIB: code-free development and deployment of deep segmentation models for digital pathology ![]() |
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DeepMIB: 2D patch-wise workflow ![]() DeepMIB: Deep learning segmentation projects of FIB-SEM dataset of a U2-OS cell ![]() |