To download MIB please select the distribution and press the corresponding button on the right:

• Matlab version - this is recommended option for those who have a Matlab license
• Standalone for Windows - MIB compiled for Matlab R2019b
• Standalone for Windows, recent Matlab - MIB compiled for the recent release of Matlab
• Standalone for MacOS - MIB compiled for Matlab R2019b for Mac OS
• GitHub - MIB source code on GitHub, virtually identical to the Matlab version above

Please look here for installation details.

Version 2.65 - 2.651 (25.04.2020)
• The deployed version of MIB comes with R2019b instead of R2017a
• Added Drag and drop files into the Image View panel
• Added dialog with 30 new image filters (Menu->Image->Image filters...)
• Added dataset alignment using AMST: Align to Median Smoothed Template (Menu->Dataset->Alignment)
• Added wound healing assay (Menu->Tools->Wound healing assay)
• Added transformation of Z to C (Menu->Dataset->Transform...)
• Added additional options to the batch processing: file loop/combine files -> current MIB directory; selection/removal of multiple directories in the Directrory loops
• Added backup of the full mibImage class
• Added full backup for dataset transform, resize, crop operations
• Added squeezing of material indices for models with more than 255 materials (Segmentation panel->Squeeze button)
• Added a new key shortcut ('n') to increase index of the active material by 1 for the models with more than 255 materials
• Added saving snapshots in PNG format
• Added measurements to restore shuffled datasets
• Updated resampling for batch processing mode
• Swapped Log and Info buttons in the Path panel
• Tweaked names of plugins to include spaces between capital letters
• Optimized handling of Java classes
• Updated Bio-Formats to 6.4.0 (requires Matlab R2017b or newer)
• Plugins: Surface Area 3D - a plugin for analysis of 3D surfaces and contacts (Menu->Plugins->Organelle analysis->Surface area3D)
• Plugins: Spacial Control Points to generate a set of random points over the masked area (Menu->Plugins->Plasmodesmata->Spatial control points)
• Plugins: Cell Wall Thickness to calculate thickness of cell walls (Menu->Plugins->Plasmodesmata->Cell wall thickness)
• [2.651] Added smoothing of multiple materials of models via batch processing
• [2.651] Fixed definition of the starting point for the Membrane ClickTracker tool
• [2.651] Fixed setData method for specific materials of the model

Click to access archive with previous versions of MIB2

Version 1.305 23.12.2016
• Improved and simplified the Segmentation panel
• Added list of recent directories
• Added "Mask_" prefix to filename when saving masks
• Added "FirstAxisLength" and "SecondAxisLength" properties to the Get Statistics dialog for calculation of exact lengths of the objects (ver 1.302)
• Added default state of the link channels checkbox to selected in the Display adjustment dialog (ver 1.302)
• The contrast normalization over selected areas in Z does not require selection of all slices
• Fix of substructures in Dataset Info dialog
• Fix of fine-tune checkbox for the freehand mode of the measure tool
• Improved performance of black-and-white thresholding
• Fix of add matarial bug (ver 1.303)
• Fix of export annotations to a file for MacOS (ver 1.303)
• Fix startup crashes for compiled MIB on some windows configurations (ver 1.304)
• Update of font size for buttons and popup menus (ver 1.305)
• Fix of a bug in the masked-based image alignment tool (ver 1.305)