MIB version 2
Actual versions
MIB Matlab 2.51 [13.03.2019]
MIB Windows 2.51 [13.03.2019]
MIB Mac 2.51 [13.03.2019]
If you have a valid Matlab license it is recommended to use MIB for Matlab environment version!

To download MIB please select the distribution and press the corresponding button on the right:
  • Matlab version - this is recommended option for those who have a Matlab license
  • Standalone for Windows - MIB compiled for Matlab R2017a
  • Standalone for Windows, recent Matlab - MIB compiled for the recent release of Matlab
  • Standalone for MacOS - MIB compiled for Matlab R2017a for Mac OS
  • GitHub - MIB source code on GitHub, virtually identical to the Matlab version above
Please look here for installation details.

    Version 2.51 (13.03.2019)
  • Added methods for automatic global black-and-white thresholding (Menu->Tools->Semi-automatic segmentation->Global thresholding)
  • Added selection of materials for rendering of Matlab Isosurface models (Menu->Models->Render model->Matlab isosurface)
  • Added calculation of images with extended depth-of-field focus stacking (Menu->Image->Tools for images->Intensity projection->Focus stacking)
  • Added export of the supervoxels from Graphcut to a model
  • Added saving of HDF5 format in the virtual mode without loading of complete stack
  • Added saving of AmiraMesh files as a sequence 2D sections (Menu->File->Save image as->Amira Mesh binary file sequence)
  • Added an option to display an orthoslice during visualization of 3D lines
  • Added tip of the day window (Menu->Help->Tip of the day)
  • Added H-maxima and H-minima transforms to Mask generators (Mask generators panel->Morphological filters)
  • Added Single Mask object per dataset option when cropping objects from the Get Statistics dialog
  • Improved performance when several materials are removed from the model
  • Improved the Image arithmetics dialog (Menu->Image->Tools for images->Image arithmetic...)
  • Updated BioFormats reader to use Memoizer class, this should hopefully fix Java memory leaks, temporary directory can be specified in Menu->File->Preferences->External dirs
  • Updated sorting of the Get Statistics dialog
  • Fixed initialization of 3D hardware rendering of models
  • Fixed pixel size when combining 2D images with different dimensions
  • Fixed adding icons to buttons when MIB is installed in network path that starts from "//"

Click to access archive with previous versions of MIB2

MIB version 1

    Version 1.305 23.12.2016
  • Improved and simplified the Segmentation panel
  • Added list of recent directories
  • Added "Mask_" prefix to filename when saving masks
  • Added "FirstAxisLength" and "SecondAxisLength" properties to the Get Statistics dialog for calculation of exact lengths of the objects (ver 1.302)
  • Added default state of the link channels checkbox to selected in the Display adjustment dialog (ver 1.302)
  • The contrast normalization over selected areas in Z does not require selection of all slices
  • Fix of substructures in Dataset Info dialog
  • Fix of fine-tune checkbox for the freehand mode of the measure tool
  • Improved performance of black-and-white thresholding
  • Fix of add matarial bug (ver 1.303)
  • Fix of export annotations to a file for MacOS (ver 1.303)
  • Fix startup crashes for compiled MIB on some windows configurations (ver 1.304)
  • Update of font size for buttons and popup menus (ver 1.305)
  • Fix of a bug in the masked-based image alignment tool (ver 1.305)

Main page >> Downloads >> Recent Version
Back to the main page Main page of the University of Helsinki Main page of the University of Helsinki Main page of the Institute of Biotechnology Main page of the Electron Microscopy Unit Back to the main page