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MIB version 2
Actual versions
MIB Matlab 2.51 [13.03.2019]
MIB Windows 2.51 [13.03.2019]
MIB Mac 2.51 [13.03.2019]
If you have a valid Matlab license it is recommended to use MIB for Matlab environment version!


To download MIB please select the distribution and press the corresponding button on the right:
  • Matlab version - this is recommended option for those who have a Matlab license
  • Standalone for Windows - MIB compiled for Matlab R2017a
  • Standalone for Windows, recent Matlab - MIB compiled for the recent release of Matlab
  • Standalone for MacOS - MIB compiled for Matlab R2017a for Mac OS
  • GitHub - MIB source code on GitHub, virtually identical to the Matlab version above
Please look here for installation details.


    Version 2.51 (13.03.2019)
  • Added methods for automatic global black-and-white thresholding (Menu->Tools->Semi-automatic segmentation->Global thresholding)
  • Added selection of materials for rendering of Matlab Isosurface models (Menu->Models->Render model->Matlab isosurface)
  • Added calculation of images with extended depth-of-field focus stacking (Menu->Image->Tools for images->Intensity projection->Focus stacking)
  • Added export of the supervoxels from Graphcut to a model
  • Added saving of HDF5 format in the virtual mode without loading of complete stack
  • Added saving of AmiraMesh files as a sequence 2D sections (Menu->File->Save image as->Amira Mesh binary file sequence)
  • Added an option to display an orthoslice during visualization of 3D lines
  • Added tip of the day window (Menu->Help->Tip of the day)
  • Added H-maxima and H-minima transforms to Mask generators (Mask generators panel->Morphological filters)
  • Added Single Mask object per dataset option when cropping objects from the Get Statistics dialog
  • Improved performance when several materials are removed from the model
  • Improved the Image arithmetics dialog (Menu->Image->Tools for images->Image arithmetic...)
  • Updated BioFormats reader to use Memoizer class, this should hopefully fix Java memory leaks, temporary directory can be specified in Menu->File->Preferences->External dirs
  • Updated sorting of the Get Statistics dialog
  • Fixed initialization of 3D hardware rendering of models
  • Fixed pixel size when combining 2D images with different dimensions
  • Fixed adding icons to buttons when MIB is installed in network path that starts from "//"


Click to access archive with previous versions of MIB2

MIB version 1


    Version 1.305 23.12.2016
  • Improved and simplified the Segmentation panel
  • Added list of recent directories
  • Added "Mask_" prefix to filename when saving masks
  • Added "FirstAxisLength" and "SecondAxisLength" properties to the Get Statistics dialog for calculation of exact lengths of the objects (ver 1.302)
  • Added default state of the link channels checkbox to selected in the Display adjustment dialog (ver 1.302)
  • The contrast normalization over selected areas in Z does not require selection of all slices
  • Fix of substructures in Dataset Info dialog
  • Fix of fine-tune checkbox for the freehand mode of the measure tool
  • Improved performance of black-and-white thresholding
  • Fix of add matarial bug (ver 1.303)
  • Fix of export annotations to a file for MacOS (ver 1.303)
  • Fix startup crashes for compiled MIB on some windows configurations (ver 1.304)
  • Update of font size for buttons and popup menus (ver 1.305)
  • Fix of a bug in the masked-based image alignment tool (ver 1.305)




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