mib_crossShiftStacks.m File Reference

[imgOut, bbShiftXY] = mib_crossShiftStacks(I1, I2, shiftX, shiftY) Shift I2 vs I1 using translation numbers in shiftX and shiftY More...

Functions
function [ imgOut , bbShiftXY ] =	mib_crossShiftStacks (I1, I2, shiftX, shiftY, options)
	[imgOut, bbShiftXY] = mib_crossShiftStacks(I1, I2, shiftX, shiftY) Shift I2 vs I1 using translation numbers in shiftX and shiftY More...

Detailed Description

[imgOut, bbShiftXY] = mib_crossShiftStacks(I1, I2, shiftX, shiftY) Shift I2 vs I1 using translation numbers in shiftX and shiftY

Function Documentation

function [ imgOut , bbShiftXY ] = mib_crossShiftStacks	(		I1,
			I2,
			shiftX,
			shiftY,
			options
	)

[imgOut, bbShiftXY] = mib_crossShiftStacks(I1, I2, shiftX, shiftY) Shift I2 vs I1 using translation numbers in shiftX and shiftY

Parameters

I1	a reference stack: [1:height, 1:width, 1:color, 1:depth]
I2	a second stack to shift over I2: [1:height, 1:width, 1:color, 1:depth]
shiftX	a value for the X-shift
shiftY	a value for the Y-shift
options	an optional structure with options .backgroundColor -> background color: black, white, mean, or a number .waitbar -> [optional] a handle to existing waitbar .modelSwitch -> 1-defines that dataset has 3 dimensions [H,W,Z], or when 0 - 4 dimensions [H,W,C,Z]

Return values

imgOut	aligned stack
bbShiftXY	a vector [xMin, yMin] with shift of the reference dataset

Required fields of options:

Referenced by mibDriftAlignDlg>continueBtn_Callback().

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