Microscopy Image Browser  1.233
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ImportExportTools Directory Reference
Directory dependency graph for ImportExportTools:
ImportExportTools

Directories

directory  export_fig
 
directory  Fiji
 
directory  HDF5
 
directory  Imaris
 
directory  nrrd
 
directory  Omero
 

Files

file  amiraLabels2bitmap.m
 Converts Amira Mesh Labels to bitmap matrix, for Amira ver. 5.2.2.
 
file  amiraMesh2bitmap.m
 Converts Amira Mesh to bitmap matrix [1:height, 1:width, 1:colors, 1:no_stacks].
 
file  bitmap2amiraLabels.m
 Convert matrix [1:height, 1:width, 1:no_stacks] to Amira Mesh Labels.
 
file  bitmap2amiraMesh.m
 Convert bitmap matrix to Amira Mesh binary format.
 
file  exportModelToImodModel.m
 Export model to Imod model type.
 
file  getAmiraMeshHeader.m
 Get header of Amira Mesh file.
 
 
file  getMRCfile.m
 Read data in MRC/REC format.
 
file  getMRCheader.m
 Read header of MRC/REC file.
 
file  ib_amiraImportGui.m
 ib_amiraImportGui function is responsible for a dialog to advanced opening of Amira Mesh files.
 
file  ib_getImages.m
 Generate image dataset from the files structure and the img_info containers.Map.
 
file  ib_image2jpg.m
 Save image in JPG format, 2D slices.
 
file  ib_image2mrc.m
 Export volume in MRC format.
 
file  ib_image2png.m
 Save image in PNG format, 2D slices.
 
file  ib_image2tiff.m
 Save image in TIF format, 2D slices or 3D stacks.
 
file  ib_imwrite.m
 Save image to a file using Matlab imwrite function.
 
file  ib_loadImages.m
 Load images from the list of files.
 
file  ib_saveVideoGui.m
 ib_saveVideoGui function is responsible for saving video files of the datasets.
 
file  ib_snapshotGui.m
 ib_snapshotGui function is responsible for making snapshots of the shown dataset.
 
file  mib_chopDatasetGui.m
 MIB_CHOPDATASETGUI MATLAB code for mib_chopDatasetGui.fig MIB_CHOPDATASETGUI, by itself, creates a new MIB_CHOPDATASETGUI or raises the existing singleton*.
 
file  mib_rechopDatasetGui.m
 MIB_RECHOPDATASETGUI MATLAB code for mib_rechopDatasetGui.fig MIB_RECHOPDATASETGUI, by itself, creates a new MIB_RECHOPDATASETGUI or raises the existing singleton*.
 
file  parseStructToTree.m
 function to parse structure (XML) to uitree object based on struct2xml.m file by W. Falkena, ASTI, TUDelft, 27-08-2010
 
file  stlwrite.m
 STLWRITE Write STL file from patch or surface data.