getImageMetadata.m File Reference

Get metadata for images. More...

Functions
function [ img_info , files , pixSize ] =	getImageMetadata (filenames, options)
	Get metadata for images. More...

Detailed Description

Get metadata for images.

Function Documentation

function [ img_info , files , pixSize ] = getImageMetadata	(		filenames,
			options
	)

Get metadata for images.

Parameters

filenames	a cell array with filenames of images
options	a structure with additional parameters .bioformatsCheck -> 0 or 1; when 1 use the BioFormats library .waitbar -> 0 or 1; when 1 shows the progress bar .customSections -> 0 or 1; when 1 obtain part of the dataset .matlabVersion -> [optional] current version of Matlab .Font -> [optional] a structure with the font settings from im_browser .FontName .FontUnits .FontSize

Return values

img_info	in the format compatible with imageData.img_info containers.Map
files	a structure with file-info, can be empty: [] .object_type -> movie, hdf5_image, image .filename .seriesName -> index of the series for HDF5/Bioformats .seriesRealName -> real names of the series for Bioformats .height .width .color .noLayers -> number of image frames in the file .imgClass -> class of the image .dim_xyczt -> dimensions for hdf5_image and Bioformats .hDataset -> handle to Bioformats dataset
pixSize	a structure with voxel dimensions (.x, .y, .z, .units, .t, .tunits)

Required fields of options:

Generated fields of pixSize:

References get_nrrd_metadata(), getAmiraMeshHeader(), getXMLheader(), ib_amiraImportGui(), mib_inputdlg(), p_json(), selectHDFSeries(), and xml2struct().

Referenced by ib_loadImages(), mibDriftAlignDlg>getMetaInfo(), mibrechopDatasetGui>combineBtn_Callback(), and mibrechopDatasetGui>loadModels().

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