Calculate black and white bitmap out of the image. More...

Functions
function [ bwimage , image_grid ] =	get_black_white_filter (img, darkthres, automatic, mask, grid_size, grid_coef, orientation, layer_id, thrMatrix)
	Calculate black and white bitmap out of the image. More...

function [ bwimage , image_grid , th_min ] =	getblackwhitefilter>do_filter (I, mask, Options, exportThrMatrixSw, thresholdImage)

Detailed Description

Calculate black and white bitmap out of the image.

Function Documentation

function [ bwimage , image_grid ] = get_black_white_filter	(	img,
		darkthres,
		automatic,
		mask,
		grid_size,
		grid_coef,
		orientation,
		layer_id,
		thrMatrix
	)

Calculate black and white bitmap out of the image.

Parameters

img	- input image, img - [1:height,1:width,1:colors,1:stacks]
darkthres	- a vector with minimal and maximal levels b/w threshold [minValue, maxValue]
automatic	- automatically define b/w thereshold, when 1
mask	- mask for the image, when only part of the image is needed
grid_size	- detection of b/w threshold based on a grid when grid_size > 0
grid_coef	- the coefficient for defining the minimal bw convertion value, if empty will be defined automatically
orientation	- indicates dimension for 2D iterations, 1 - XZ, 2 - YZ, 4 - XY
layer_id	- define a single slice from the dataset when layer_id > 0 - threshold the slice with this number when layer_id == 0 - threshold the whole dataset when layer_id omitted - threshold the whole dataset
thrMatrix	[optional] matrix with thresholding coefficients, default = NaN

Return values

bwimage - thresholded b/w image image_grid - image with the applied grid

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function [bwimage , image_grid , th_min ] = getblackwhitefilter>do_filter	(	I,
		mask,
		Options,
		exportThrMatrixSw,
		thresholdImage
	)