Microscopy Image Browser  1.233
All Classes Files Functions Variables Pages
ib_getImarisDataset.m File Reference

Get a dataset opened in Imaris and corresponding meta-data. More...

Functions

function [ img ,

img_info ,
viewPort ,
handles ] = 
ib_getImarisDataset (handles)
 Get a dataset opened in Imaris and corresponding meta-data. More...
 
function imOut = ibgetImarisDataset>getByBlocks (connImaris, colId, timePoint)
 

Detailed Description

Get a dataset opened in Imaris and corresponding meta-data.

Function Documentation

function [ img , img_info , viewPort ] = ib_getImarisDataset (   handles)

Get a dataset opened in Imaris and corresponding meta-data.

Parameters
handleshandles structure from im_browser
Return values
img4D dataset
img_infoContainers.Map with meta data
viewPorta structure with the viewPort parameters .min - a vector with minimal intensities for contrast adjustment .max - a vector with maximal intensities for contrast adjustment .gamma - a vector with gamma factor for contrast adjustment
handleshandles structure from im_browser
Required fields of handles:
Generated fields of handles:
Parameters
handleshandles structure from im_browser
Return values
img4D dataset
img_infoContainers.Map with meta data
viewPorta structure with the viewPort parameters .min - a vector with minimal intensities for contrast adjustment .max - a vector with maximal intensities for contrast adjustment .gamma - a vector with gamma factor for contrast adjustment
Required fields of handles:

Examples:

[img, img_info] = ib_getImarisDataset(handles); // get dataset from imaris

References IceImarisConnector.IceImarisConnector(), and mib_inputdlg().

Referenced by menuFileImportImage().

Here is the call graph for this function:

Here is the caller graph for this function:

function imOut = ibgetImarisDataset>getByBlocks (   connImaris,
  colId,
  timePoint 
)