ib_getImarisDataset.m File Reference

Get a dataset opened in Imaris and corresponding meta-data. More...

Functions
function [ img , img_info , viewPort , handles ] =	ib_getImarisDataset (handles)
	Get a dataset opened in Imaris and corresponding meta-data. More...
function imOut =	ibgetImarisDataset>getByBlocks (connImaris, colId, timePoint)

Detailed Description

Get a dataset opened in Imaris and corresponding meta-data.

Function Documentation

function [ img , img_info , viewPort ] = ib_getImarisDataset

(

handles

)

Get a dataset opened in Imaris and corresponding meta-data.

Parameters

handles

handles structure from im_browser

Return values

img	4D dataset
img_info	Containers.Map with meta data
viewPort	a structure with the viewPort parameters .min - a vector with minimal intensities for contrast adjustment .max - a vector with maximal intensities for contrast adjustment .gamma - a vector with gamma factor for contrast adjustment
handles	handles structure from im_browser

Required fields of handles:

Generated fields of handles:

Parameters

handles

handles structure from im_browser

Return values

img	4D dataset
img_info	Containers.Map with meta data
viewPort	a structure with the viewPort parameters .min - a vector with minimal intensities for contrast adjustment .max - a vector with maximal intensities for contrast adjustment .gamma - a vector with gamma factor for contrast adjustment

Required fields of handles:

Examples:

[img, img_info] = ib_getImarisDataset(handles);     // get dataset from imaris 

References IceImarisConnector.IceImarisConnector(), and mib_inputdlg().

Referenced by menuFileImportImage().

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function imOut = ibgetImarisDataset>getByBlocks	(		connImaris,
			colId,
			timePoint
	)