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Microscopy Image Browser 2.91
MIB
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Microscopy Image Browser 2.91
MIB
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| ▼CBlock | |
| Citerator | |
| Ccell | A MatLab cell array or matrix |
| Cchar | A MatLab character array |
| Ccolvec | A matlab column vector |
| CDBlock | |
| CdicePixelCustomClassificationLayer | This layer implements the generalized Dice loss function for training semantic segmentation networks |
| Cdouble | A double value |
| Cfunction_handle | A MatLab function handle |
| CGraph | |
| Chandle | Matlab's base handle class (documentation generation substitute) |
| CIceImarisConnector | |
| Cinteger | An integer value |
| CLabels | Class is responsible for keeping Labels/Annotations of the model |
| CLines3D | Class is responsible for keeping 3d lines and skeletons |
| Clogical | A boolean value |
| Cmatrix | A matlab matrix |
| CmibAboutController | Controller class for the About window |
| CmibAlignmentController | Controller class for alignment of datasets |
| CmibAnnotationsController | Controller class for the list of annotations available via MIB->Menu->Models->Annotations->List of annotations |
| CmibBatchController | This a template class for making GUI windows for MIB it is the second version that was designed to be compatible with future macro editor |
| CmibBoundingBoxController | Class is responsible for display of the Bounding Box window, available from MIB->Menu->Dataset->Bounding Box |
| CmibChildView | Class is a template of the View type classes for each controller |
| CmibChopDatasetController | Controller class for chopping the dataset into several smaller ones |
| CmibController | Main controller for MIB |
| CmibCropController | Class is responsible for showing the dataset crop window, available from MIB->Menu->Dataset->Crop |
| CmibCropObjectsController | Controller class for the crop objects to file options of the context menu of the Get Statistics window |
| CmibDatasetInfoController | Controller class for the Dataset information window available via the Info button of the Path panel |
| CmibDebrisRemovalController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibDeepActivationsController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibDeepAugmentSettingsController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibDeepController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibExternalDirsController | |
| CmibGraphcutController | Class is responsible for showing the graphcut segmentation window, available from MIB->Menu->Tools->Graphcut segmentation |
| CmibHistThresController | Class is responsible for showing the Morphological operations for images window, available from MIB->Menu->Tools->Semi-automatic segmentation->Automatic black-and-white thresholding |
| CmibImage | Basic class to contain individual datasets loaded in MIB. This class is ruled by the mibModel class |
| CmibImageAdjController | Class is responsible for showing the dataset adjustment window, available from MIB->View settings panel->Display |
| CmibImageArithmeticController | This class drives image arithmetic tools of MIB using these tools it is possible to do custom arithmetic operations with one or several open datasets It is available from MIB->Menu->Image->Tools for Images->Image arithmetic This tool can be started from mibController as |
| CmibImageFiltersController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibImageMorphOpsController | Class is responsible for showing the Morphological operations for images window, available from MIB->Menu->Image->MorphOps |
| CmibImageSelectFrameController | Class is responsible for selection of pixels at the borders of images available from MIB->Menu->Image->Tools for images->Select borders.. |
| CmibImageUndo | This class is responsible to store the previous versions of the dataset, to be used for Undo (Ctrl+Z) command |
| CmibImportOmeroController | |
| CmibKeyShortcutsController | Controller class for the MIB Key Shortcuts dialog |
| CmibLines3DController | Controller class for the table views of lines 3d |
| CmibLogListController | Controller class for the log of actions available via the Log button of the Path panel |
| CmibMakeMovieController | Controller class for the render movie window available via MIB->Menu->File->Make movie |
| CmibMeasure | Class is responsible for keeping Measurements |
| CmibMeasureToolController | Controller class for the measurements subwindow available via MIB->Menu->Tools->Measure length->Measure tool |
| CmibMembraneDetectionController | Class is responsible for showing the Membrane Detection window, available from MIB->Menu->Tools->Classifiers->Membrane detections |
| CmibModel | Main model class of MIB |
| CmibMorphOpsController | Class is responsible for showing the morphological operations for the selection layer window, available from MIB->Selection->Morphological 2D/3D operations |
| CmibObjSepController | Class is responsible for showing the object separation window, available from MIB->Menu->Tools->Object separation |
| CmibPreferencesAppController | Class displays preferences dialog using appdesigner created GUI |
| CmibPreferencesController | Controller class for the MIB Preferences dialog |
| CmibRandomDatasetController | Controller class for chopping the dataset into several smaller ones |
| CmibRandomRestoreDatasetController | Controller class for chopping the dataset into several smaller ones |
| CmibRechopDatasetController | Controller class for re-chopping several small datasets into a single one |
| CmibResampleController | Class is responsible for showing the dataset resample window, available from MIB->Menu->Dataset->Resample |
| CmibRoiRegion | Class is responsible to keep regions of interest (ROI) |
| CmibSnapshotController | Controller class for the snapshots subwindow available via MIB->Menu->File->Make snapshot |
| CmibStatisticsController | Controller class for the get statistics window available via MIB->Menu->Models->Model statistics |
| CmibStereologyController | Class is responsible for showing the stereology analysis window, available from MIB->Menu->Tools->Stereology |
| CmibSupervoxelClassifierController | Class is responsible for showing the supervoxel classifier, available from MIB->Menu->Tools->Classifiers->Supervoxel classification |
| CmibTipsAppController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibTipsController | This is controller class for showing tips of the day |
| CmibUpdateCheckController | |
| CmibView | Main view class of MIB |
| CmibVolRenAppController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibVolRenAppViewerController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibVolRenController | Class is responsible for 3D rendering of volumes or models |
| CmibWatershedController | Class is responsible for showing the watershed/graphcut segmentation window, available from MIB->Menu->Tools->Watershed/Graphcut segmentation |
| CmibWhiteBalanceController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CmibWoundHealingAssayController | Class is a template class for using with GUI developed using appdesigner of Matlab |
| CPoolWaitbar | Waitbar for parallel loops based on answer by Edric Ellis from https://se.mathworks.com/matlabcentral/answers/465911-parfor-waitbar-how-to-do-this-more-cleanly |
| Crowvec | A matlab row vector |
| Csparsematrix | A matlab sparse matrix |
| Cstruct | A MatLab struct |
| Cvarargin | A variable number of input arguments |
| Cvarargout | A variable number of output arguments |
| CvolrenAnimationController |
1.13.2